Nt1310 Unit 3 Lab Report

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i) To monitor the circulating RV strains/genotypes in environmental samples. Just like the oral polio vaccine (OPV), the two rotavirus vaccines are live-attenuated vaccines and they will always be shed in the environment through feces. In this objective, the monitoring of sewage for both RV wild types and vaccine strains will help in understanding the efficacy of the RV vaccine and will also documenting the epidemiology and seasonality of this strains and also in correlating the strains identified with strains isolated in clinical samples. This is made possible through molecular characterization and typing of environmental RV strains genetically and comparing the data of prototype, vaccines and clinical relevant strains from other regions. ii) To determine monitor the shedding of rotavirus vaccines strains in the environment. Just like poliovirus individuals with acute gastroenteritis associated with RV excretes the high concentration of virus through feces and it is well documented that a infected individual can shed more that 1010 infectious particles per gram of feces. The virus can persist in …show more content…
Since rotavirus is a double stranded RNA virus and segmented it tend to reassort and is able to evolve rapidly via genetic drift, genomic rearrangement, duplications, and deletions of gene sequences, as well as through the zoonotic transmission of strains. In places that are connected by a sewer system or having animal farms rotavirus can be detected in sewage or other environmental samples. e.g in urban areas rotavirus excreted by hospitalized children who are under 5 years of age, the age group mostly affected by this virus ends up into the wastewater. Animals rotavirus coming from farms runoffs can be a source of information of any zoonotic strains that might be in circulation and which has a potential to reassort with the human strains which can. lead emergence of novel RV